Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx1-1G3UXB3 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm38404-201ENSMUST00000202005 2496 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Clstn3-201ENSMUST00000008297 4014 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Kcnj3-202ENSMUST00000112632 4068 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Mir208b-201ENSMUST00000104735 77 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm11920-201ENSMUST00000118491 563 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm14765-201ENSMUST00000121954 326 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm16353-201ENSMUST00000159458 1223 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm22290-201ENSMUST00000177655 107 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm22583-201ENSMUST00000178031 107 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm27684-201ENSMUST00000183778 80 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm29086-201ENSMUST00000186774 222 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm29085-201ENSMUST00000187108 225 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm36983-201ENSMUST00000192280 1102 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm7019-201ENSMUST00000194122 369 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm44565-201ENSMUST00000208194 269 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm31166-201ENSMUST00000209326 288 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm26263-201ENSMUST00000083281 164 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 A3galt2-201ENSMUST00000030585 3390 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 AC156802.2-201ENSMUST00000225239 5740 ntBASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nkx1-1G3UXB3 Cd200-201ENSMUST00000023341 2085 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Sema4d-202ENSMUST00000110039 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Smok3c-201ENSMUST00000110967 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Nkx1-1G3UXB3 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm11880-201ENSMUST00000117612 399 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm12956-201ENSMUST00000122184 414 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm24435-201ENSMUST00000157886 110 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm17152-201ENSMUST00000172430 535 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm22114-201ENSMUST00000177756 107 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm17045-201ENSMUST00000178600 844 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm24518-201ENSMUST00000180275 94 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm45473-201ENSMUST00000211452 616 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 AC113107.1-201ENSMUST00000218358 396 ntTSL 3 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm18620-201ENSMUST00000222295 324 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 AC154335.2-201ENSMUST00000225916 638 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 AC115291.2-201ENSMUST00000228335 437 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 AC166369.2-201ENSMUST00000228403 308 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Olfr549-201ENSMUST00000098227 951 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 AC160340.2-201ENSMUST00000220812 3675 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Trim36-201ENSMUST00000037011 4544 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm17229-202ENSMUST00000166792 1753 ntBASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nkx1-1G3UXB3 Scml2-204ENSMUST00000087090 2953 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms