Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Cmah-208ENSMUST00000224819 9482 ntBASIC5.83□□□□□ -1.48
Scn3aA2ASI5 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm24578-201ENSMUST00000103970 129 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm24160-201ENSMUST00000104594 126 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm15670-201ENSMUST00000117740 447 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm18177-201ENSMUST00000188373 404 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm5244-202ENSMUST00000189517 743 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm37719-201ENSMUST00000194615 292 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm44307-201ENSMUST00000204466 764 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Snord15b-201ENSMUST00000083032 145 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm9442-201ENSMUST00000194242 319 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Scn3aA2ASI5 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm14046-201ENSMUST00000119389 509 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm13333-201ENSMUST00000119424 781 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm15390-201ENSMUST00000120323 738 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm5699-201ENSMUST00000152491 723 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Scn3aA2ASI5 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm17081-201ENSMUST00000167363 478 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms