Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm11975-201ENSMUST00000118772 481 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm23050-201ENSMUST00000158775 165 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm26057-201ENSMUST00000178099 165 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm27210-201ENSMUST00000184263 402 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm28996-201ENSMUST00000190316 721 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm37070-201ENSMUST00000193272 460 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm45850-201ENSMUST00000212536 338 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm7802-201ENSMUST00000216464 262 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 CT009515.3-201ENSMUST00000226509 671 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CtcflA2APF3 AC120375.2-202ENSMUST00000228722 397 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm43258-201ENSMUST00000200312 1950 ntBASIC4.87□□□□□ -1.63
CtcflA2APF3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CtcflA2APF3 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC4.87□□□□□ -1.63
CtcflA2APF3 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CtcflA2APF3 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Mir466i-201ENSMUST00000116924 121 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm22514-201ENSMUST00000122547 308 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm24741-201ENSMUST00000158857 106 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm19560-201ENSMUST00000177510 514 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm21399-201ENSMUST00000180210 597 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm37492-201ENSMUST00000191948 376 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm37336-202ENSMUST00000193705 468 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm8920-201ENSMUST00000196153 924 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm43222-201ENSMUST00000199013 603 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm43629-201ENSMUST00000201782 704 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm18009-201ENSMUST00000203239 1016 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm44239-201ENSMUST00000204228 271 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.86□□□□□ -1.63
CtcflA2APF3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm18789-201ENSMUST00000216115 550 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 AC155941.1-201ENSMUST00000220223 529 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.86□□□□□ -1.63
CtcflA2APF3 AC152394.2-202ENSMUST00000228503 1064 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CtcflA2APF3 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm8526-201ENSMUST00000079153 475 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Olfr467-201ENSMUST00000084756 927 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CtcflA2APF3 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.86□□□□□ -1.63
CtcflA2APF3 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CtcflA2APF3 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms