Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm24719-201ENSMUST00000157520 110 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm23354-201ENSMUST00000158426 104 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm27030-201ENSMUST00000182551 464 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm27887-201ENSMUST00000184367 102 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm28567-201ENSMUST00000190270 693 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm37044-201ENSMUST00000193531 693 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm38369-201ENSMUST00000195101 693 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm42428-201ENSMUST00000198677 302 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Clec2j-202ENSMUST00000203658 606 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm18541-201ENSMUST00000215935 538 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm18789-201ENSMUST00000216115 550 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lima1Q9ERG0 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.15□□□□□ -1.58
Lima1Q9ERG0 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Lima1Q9ERG0 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lima1Q9ERG0 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lima1Q9ERG0 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Lima1Q9ERG0 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Lima1Q9ERG0 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Lima1Q9ERG0 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Lima1Q9ERG0 Gm14756-201ENSMUST00000116395 240 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm13787-201ENSMUST00000120422 168 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm12267-201ENSMUST00000121609 761 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm21990-201ENSMUST00000124692 383 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm3216-201ENSMUST00000166927 486 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm3141-201ENSMUST00000168726 499 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Mir7211-201ENSMUST00000184071 63 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm42522-201ENSMUST00000196071 255 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm44074-201ENSMUST00000204562 337 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm18587-201ENSMUST00000213736 841 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm8911-201ENSMUST00000213986 652 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm25818-201ENSMUST00000083282 164 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lima1Q9ERG0 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms