Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3a3Q9D554 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3a3Q9D554 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sf3a3Q9D554 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.51□□□□□ -1.53
Sf3a3Q9D554 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm23768-201ENSMUST00000104440 131 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm6977-201ENSMUST00000121568 512 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm14589-201ENSMUST00000121640 727 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm7309-201ENSMUST00000121670 581 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm11879-201ENSMUST00000121885 702 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm26069-201ENSMUST00000157497 277 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm23069-201ENSMUST00000158240 311 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm27148-201ENSMUST00000185086 160 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm28926-201ENSMUST00000191063 680 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm44316-201ENSMUST00000199274 97 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm19921-201ENSMUST00000210505 703 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm3912-203ENSMUST00000211024 367 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 AC162934.3-201ENSMUST00000223015 841 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Cma2-202ENSMUST00000228263 857 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm6863-201ENSMUST00000052882 636 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.5□□□□□ -1.53
Sf3a3Q9D554 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm11271-201ENSMUST00000116054 440 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm12656-201ENSMUST00000118149 577 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm14620-201ENSMUST00000120656 383 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm12041-201ENSMUST00000121606 602 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm12488-201ENSMUST00000122449 499 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm23888-201ENSMUST00000122690 253 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm25065-201ENSMUST00000177914 132 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm25891-201ENSMUST00000180050 132 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm29534-201ENSMUST00000187328 382 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm18553-201ENSMUST00000194152 634 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm18843-201ENSMUST00000194982 719 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm38328-201ENSMUST00000195582 317 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm18611-201ENSMUST00000200334 1118 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm43629-201ENSMUST00000201782 704 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gm45724-201ENSMUST00000213031 420 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sf3a3Q9D554 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.49□□□□□ -1.53
Sf3a3Q9D554 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms