Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm14938-201ENSMUST00000119482 943 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm12482-201ENSMUST00000120435 630 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm12332-201ENSMUST00000121397 922 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm27818-201ENSMUST00000184536 159 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm17988-201ENSMUST00000208796 535 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm45343-201ENSMUST00000210452 828 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm4012-201ENSMUST00000221504 581 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm16335-201ENSMUST00000077495 309 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc28aQ8CEI3 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm12717-201ENSMUST00000118427 983 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm12820-201ENSMUST00000119233 342 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm13787-201ENSMUST00000120422 168 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm23965-201ENSMUST00000157969 142 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm23318-201ENSMUST00000158000 108 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm24944-201ENSMUST00000158330 128 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm4134-201ENSMUST00000173244 563 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm38015-201ENSMUST00000193048 188 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm42694-201ENSMUST00000196951 358 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Mir219c-201ENSMUST00000199860 60 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm42663-201ENSMUST00000199883 351 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm2645-201ENSMUST00000223516 547 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Gm8526-201ENSMUST00000079153 475 ntBASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28aQ8CEI3 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28aQ8CEI3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28aQ8CEI3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28aQ8CEI3 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28aQ8CEI3 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc28aQ8CEI3 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm13195-201ENSMUST00000117229 261 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm12039-201ENSMUST00000118219 180 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm14712-201ENSMUST00000120195 772 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm12007-201ENSMUST00000120978 597 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm23837-201ENSMUST00000122656 286 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm12833-201ENSMUST00000136112 477 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm5699-201ENSMUST00000152491 723 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm25445-201ENSMUST00000158996 299 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm6632-201ENSMUST00000168425 954 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm18828-202ENSMUST00000181035 310 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms