Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm23225-201ENSMUST00000158121 114 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm7609-204ENSMUST00000161424 461 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm27688-201ENSMUST00000183634 91 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm27266-201ENSMUST00000184521 123 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm28883-201ENSMUST00000189256 369 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm37966-201ENSMUST00000193122 326 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm37681-201ENSMUST00000193880 727 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm2645-201ENSMUST00000223516 547 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Thoc7-209ENSMUST00000225325 765 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm25682-201ENSMUST00000083942 164 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.38□□□□□ -1.55
Trub1Q8C0D0 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm23750-201ENSMUST00000104222 132 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm14086-201ENSMUST00000117152 173 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm3943-201ENSMUST00000118606 718 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm14871-201ENSMUST00000119056 194 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm15034-201ENSMUST00000120043 349 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm6542-201ENSMUST00000153606 772 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm24236-201ENSMUST00000157794 134 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm27854-201ENSMUST00000175578 244 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm27985-201ENSMUST00000185112 378 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm37882-201ENSMUST00000195254 196 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trub1Q8C0D0 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm11486-201ENSMUST00000107322 478 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm6047-201ENSMUST00000167221 574 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm45777-201ENSMUST00000213009 301 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm24763-201ENSMUST00000083688 190 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.36□□□□□ -1.55
Trub1Q8C0D0 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms