Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm15490-201ENSMUST00000119894 387 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm16200-201ENSMUST00000120385 331 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm14905-201ENSMUST00000122351 639 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm25824-201ENSMUST00000157092 121 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm22895-201ENSMUST00000157508 308 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Mir3473c-201ENSMUST00000175262 81 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm22420-201ENSMUST00000178795 126 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm28017-201ENSMUST00000183434 126 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm37966-201ENSMUST00000193122 326 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm6543-201ENSMUST00000197353 808 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm4374-201ENSMUST00000204929 424 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm44539-201ENSMUST00000206010 238 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AL929265.1-201ENSMUST00000213427 125 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AC113305.1-201ENSMUST00000214664 724 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm6474-201ENSMUST00000223250 699 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AC147639.1-201ENSMUST00000224216 661 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 AC159476.1-201ENSMUST00000215914 1668 ntBASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sh3rf2Q8BZT2 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sh3rf2Q8BZT2 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sh3rf2Q8BZT2 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm25422-201ENSMUST00000104219 129 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm8051-201ENSMUST00000120464 466 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm3242-201ENSMUST00000171273 485 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm22254-201ENSMUST00000179186 110 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm27817-201ENSMUST00000184302 233 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm37987-201ENSMUST00000194999 825 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm9332-201ENSMUST00000198431 730 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm43554-201ENSMUST00000199987 186 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm44353-201ENSMUST00000200618 138 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm9278-201ENSMUST00000205508 553 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm45156-201ENSMUST00000207255 439 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 Gm45405-201ENSMUST00000211544 609 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.71□□□□□ -1.5
Sh3rf2Q8BZT2 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms