Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm37000-201ENSMUST00000193058 428 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Clec2j-202ENSMUST00000203658 606 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm44212-201ENSMUST00000205016 897 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm18268-201ENSMUST00000208445 943 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm19137-201ENSMUST00000213790 1164 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 AC159819.1-201ENSMUST00000213911 328 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm19256-201ENSMUST00000218550 231 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 AC147639.1-201ENSMUST00000224216 661 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm6104-201ENSMUST00000078030 603 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm10780-201ENSMUST00000099459 285 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm9239-201ENSMUST00000186942 2557 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 LOC102637012-201ENSMUST00000217248 2562 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm44829-201ENSMUST00000208008 3193 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm14520-201ENSMUST00000119258 387 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Defa-ps11-201ENSMUST00000119719 299 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm11227-201ENSMUST00000119774 471 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm14620-201ENSMUST00000120656 383 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm15428-201ENSMUST00000121352 333 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm25179-201ENSMUST00000122632 128 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm24382-201ENSMUST00000122698 107 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm8358-201ENSMUST00000167222 555 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm4845-201ENSMUST00000179202 562 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Mir6903-201ENSMUST00000183597 88 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm27755-201ENSMUST00000184623 132 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm18150-201ENSMUST00000195341 645 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm6049-201ENSMUST00000222369 458 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 AC192088.3-201ENSMUST00000227858 831 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Ube2nl-201ENSMUST00000085228 456 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 AC156031.1-201ENSMUST00000217288 2555 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm28320-201ENSMUST00000187777 2273 ntBASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Usp40Q8BWR4 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 AC117608.2-201ENSMUST00000224124 1363 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Lipe-203ENSMUST00000105177 1251 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm2288-201ENSMUST00000118560 638 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm2318-201ENSMUST00000119623 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm11825-201ENSMUST00000120710 736 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms