Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm23839-201ENSMUST00000116957 109 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm5073-201ENSMUST00000118222 820 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm11447-201ENSMUST00000118983 858 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm14520-201ENSMUST00000119258 387 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm11533-201ENSMUST00000120287 477 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm11679-201ENSMUST00000121830 779 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm23280-201ENSMUST00000157905 139 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm24957-201ENSMUST00000179604 132 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm27210-201ENSMUST00000184263 402 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm2429-201ENSMUST00000194635 586 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm43596-201ENSMUST00000202818 884 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm10709-201ENSMUST00000213318 480 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm46223-201ENSMUST00000215196 675 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm18997-201ENSMUST00000216353 822 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc40Q8BI79 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm22372-201ENSMUST00000104589 136 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm22959-201ENSMUST00000122514 303 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm22916-201ENSMUST00000157616 119 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm23121-201ENSMUST00000157653 173 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm24731-201ENSMUST00000158227 131 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm17711-201ENSMUST00000172028 237 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm27460-201ENSMUST00000184213 100 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm18702-201ENSMUST00000196923 588 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm45700-201ENSMUST00000205866 347 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm45750-201ENSMUST00000211966 354 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Mir143-201ENSMUST00000083511 63 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms