Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm26075-201ENSMUST00000104062 121 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm25420-201ENSMUST00000104216 127 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm13367-201ENSMUST00000119955 796 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm11506-201ENSMUST00000122414 470 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.51□□□□□ -1.85
PrkdcP97313 AL645522.1-201ENSMUST00000197692 104 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Mir20a-201ENSMUST00000083508 107 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PrkdcP97313 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 AC118639.1-203ENSMUST00000228425 2016 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm12850-201ENSMUST00000119210 436 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm12852-201ENSMUST00000119478 719 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm14998-201ENSMUST00000120502 495 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm20428-201ENSMUST00000174365 283 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm42776-201ENSMUST00000198031 406 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm8703-201ENSMUST00000203793 730 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm8189-203ENSMUST00000211159 1225 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 AC160031.1-201ENSMUST00000219914 522 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PrkdcP97313 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm43229-201ENSMUST00000201812 1850 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PrkdcP97313 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 AC124516.3-201ENSMUST00000221302 3613 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 AC151904.4-201ENSMUST00000219868 1319 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm38351-201ENSMUST00000195466 2518 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm24376-201ENSMUST00000104399 127 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm25564-201ENSMUST00000104604 132 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm11987-201ENSMUST00000118524 381 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
PrkdcP97313 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Mir8097-201ENSMUST00000185150 119 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 AC241593.2-201ENSMUST00000225099 510 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 AC131033.2-201ENSMUST00000228138 1011 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 CT025604.1-201ENSMUST00000221111 3436 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm19131-202ENSMUST00000203464 3208 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm44535-201ENSMUST00000208889 3136 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm12633-201ENSMUST00000117742 1705 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm15182-201ENSMUST00000120832 1676 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
PrkdcP97313 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 AC164567.3-201ENSMUST00000217743 2869 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm24124-201ENSMUST00000104103 132 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm15038-201ENSMUST00000122144 296 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm37581-201ENSMUST00000192371 988 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm32526-201ENSMUST00000221878 981 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 n-R5s27-201ENSMUST00000093699 119 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm20768-201ENSMUST00000199527 2338 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
PrkdcP97313 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm8823-201ENSMUST00000193158 433 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm19096-201ENSMUST00000209705 766 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms