Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm20691-201ENSMUST00000176889 333 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm17786-201ENSMUST00000182000 427 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Mir6769b-201ENSMUST00000184793 60 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm18900-201ENSMUST00000193218 584 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm43007-201ENSMUST00000197618 291 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm44252-201ENSMUST00000204187 330 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm44910-201ENSMUST00000208451 396 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm10126-201ENSMUST00000221732 168 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm9762-201ENSMUST00000036976 444 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sf3b6P59708 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.82□□□□□ -1.48
Sf3b6P59708 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.82□□□□□ -1.48
Sf3b6P59708 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sf3b6P59708 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3b6P59708 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC5.82□□□□□ -1.48
Sf3b6P59708 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm26417-201ENSMUST00000104274 135 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm13733-201ENSMUST00000117290 535 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm11517-201ENSMUST00000119491 387 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm9439-201ENSMUST00000119554 973 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm7571-201ENSMUST00000120252 927 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm13162-201ENSMUST00000121481 454 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm11692-201ENSMUST00000122121 902 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm22199-201ENSMUST00000122660 126 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm22841-201ENSMUST00000158443 62 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm25048-201ENSMUST00000158598 91 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm26025-201ENSMUST00000158655 271 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm8224-201ENSMUST00000166178 497 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm17212-201ENSMUST00000166666 259 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm23018-201ENSMUST00000177928 109 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm26587-201ENSMUST00000180795 989 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Mir7058-201ENSMUST00000184637 75 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm38291-201ENSMUST00000193671 259 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm37341-201ENSMUST00000194680 371 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm20128-201ENSMUST00000196189 417 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm8454-201ENSMUST00000196980 811 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm44673-201ENSMUST00000205692 996 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm45100-201ENSMUST00000209153 391 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 AC153971.2-201ENSMUST00000214553 777 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm7495-201ENSMUST00000215099 426 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm18487-201ENSMUST00000215826 878 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm46311-201ENSMUST00000217971 203 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm18628-201ENSMUST00000220584 475 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.81□□□□□ -1.48
Sf3b6P59708 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.81□□□□□ -1.48
Sf3b6P59708 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms