Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm27820-201ENSMUST00000183628 175 ntBASIC8.08□□□□□ -1.12
Cux1P53564 Gm29332-201ENSMUST00000190829 227 ntBASIC8.08□□□□□ -1.12
Cux1P53564 Gm4714-201ENSMUST00000203395 279 ntBASIC8.08□□□□□ -1.12
Cux1P53564 Gm9685-201ENSMUST00000211275 538 ntBASIC8.08□□□□□ -1.12
Cux1P53564 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cux1P53564 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cux1P53564 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Cux1P53564 Gm38351-201ENSMUST00000195466 2518 ntBASIC8.08□□□□□ -1.12
Cux1P53564 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cux1P53564 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Cux1P53564 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cux1P53564 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Cux1P53564 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC8.07□□□□□ -1.12
Cux1P53564 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC8.07□□□□□ -1.12
Cux1P53564 Gm44695-201ENSMUST00000205567 1631 ntBASIC8.07□□□□□ -1.12
Cux1P53564 Mup-ps18-201ENSMUST00000120145 531 ntBASIC8.07□□□□□ -1.12
Cux1P53564 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC8.07□□□□□ -1.12
Cux1P53564 Mir1947-201ENSMUST00000158235 85 ntBASIC8.07□□□□□ -1.12
Cux1P53564 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC8.07□□□□□ -1.12
Cux1P53564 Gm43237-201ENSMUST00000196835 1044 ntBASIC8.07□□□□□ -1.12
Cux1P53564 Mir5121-201ENSMUST00000198528 74 ntBASIC8.07□□□□□ -1.12
Cux1P53564 Gm44134-202ENSMUST00000204777 545 ntBASIC8.07□□□□□ -1.12
Cux1P53564 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Cux1P53564 AC154305.3-201ENSMUST00000224661 552 ntBASIC8.07□□□□□ -1.12
Cux1P53564 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Cux1P53564 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cux1P53564 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC8.07□□□□□ -1.12
Cux1P53564 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Cux1P53564 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC8.06□□□□□ -1.12
Cux1P53564 Gm43485-201ENSMUST00000199292 1710 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 Gm42528-201ENSMUST00000200697 3418 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 Gm12413-201ENSMUST00000121508 312 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Gm25103-201ENSMUST00000122671 318 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Gm24628-201ENSMUST00000122761 289 ntBASIC8.06□□□□□ -1.12
Cux1P53564 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 Gm22569-201ENSMUST00000175545 124 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Gm9320-201ENSMUST00000184151 473 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Gm28769-201ENSMUST00000190176 615 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Gm2147-201ENSMUST00000193588 639 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Gm6051-201ENSMUST00000201529 352 ntBASIC8.06□□□□□ -1.12
Cux1P53564 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC8.06□□□□□ -1.12
Cux1P53564 AC153943.1-201ENSMUST00000219312 256 ntBASIC8.06□□□□□ -1.12
Cux1P53564 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC8.06□□□□□ -1.12
Cux1P53564 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cux1P53564 Gm5045-201ENSMUST00000027054 810 ntBASIC8.06□□□□□ -1.12
Cux1P53564 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Cux1P53564 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Cux1P53564 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Cux1P53564 Gm45179-201ENSMUST00000208452 4337 ntBASIC8.05□□□□□ -1.12
Cux1P53564 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC8.05□□□□□ -1.12
Cux1P53564 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Cux1P53564 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Cux1P53564 Gm11790-201ENSMUST00000119569 455 ntBASIC8.05□□□□□ -1.12
Cux1P53564 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC8.05□□□□□ -1.12
Cux1P53564 Gm26034-201ENSMUST00000158154 116 ntBASIC8.05□□□□□ -1.12
Cux1P53564 Gm25605-201ENSMUST00000158364 124 ntBASIC8.05□□□□□ -1.12
Cux1P53564 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC8.05□□□□□ -1.12
Cux1P53564 Gm44412-201ENSMUST00000203018 294 ntBASIC8.05□□□□□ -1.12
Cux1P53564 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Cux1P53564 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Cux1P53564 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Cux1P53564 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Cux1P53564 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Cux1P53564 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Cux1P53564 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC8.05□□□□□ -1.12
Cux1P53564 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC8.05□□□□□ -1.12
Cux1P53564 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Cux1P53564 AC132852.2-201ENSMUST00000216052 2794 ntBASIC8.05□□□□□ -1.12
Cux1P53564 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Cux1P53564 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC8.05□□□□□ -1.12
Cux1P53564 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Cux1P53564 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Cux1P53564 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC8.04□□□□□ -1.12
Cux1P53564 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Cux1P53564 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC8.04□□□□□ -1.12
Cux1P53564 Gm24469-201ENSMUST00000104487 131 ntBASIC8.04□□□□□ -1.12
Cux1P53564 n-R5s61-201ENSMUST00000122711 118 ntBASIC8.04□□□□□ -1.12
Cux1P53564 Scarna10-201ENSMUST00000158992 325 ntBASIC8.04□□□□□ -1.12
Cux1P53564 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Cux1P53564 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC8.04□□□□□ -1.12
Cux1P53564 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC8.04□□□□□ -1.12
Cux1P53564 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC8.04□□□□□ -1.12
Cux1P53564 AC134439.1-201ENSMUST00000220923 600 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms