Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 CT573422.1-201ENSMUST00000216655 405 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.16□□□□□ -1.42
Shmt1P50431 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Shmt1P50431 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Shmt1P50431 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm9427-201ENSMUST00000116187 651 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm13195-201ENSMUST00000117229 261 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm8424-201ENSMUST00000117716 988 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm14106-201ENSMUST00000119382 438 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm12768-201ENSMUST00000120055 759 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm14989-201ENSMUST00000120497 207 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm3757-201ENSMUST00000125878 675 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm24002-201ENSMUST00000158456 104 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm24768-201ENSMUST00000158512 94 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm25839-201ENSMUST00000158921 103 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.15□□□□□ -1.42
Shmt1P50431 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm17121-201ENSMUST00000170414 847 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm17222-201ENSMUST00000180135 847 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm27679-201ENSMUST00000184612 84 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm43467-201ENSMUST00000197441 437 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm43005-201ENSMUST00000199015 648 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm42646-201ENSMUST00000202233 914 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.15□□□□□ -1.42
Shmt1P50431 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.15□□□□□ -1.42
Shmt1P50431 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 AC154552.5-201ENSMUST00000222352 207 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 AC114916.1-201ENSMUST00000228465 494 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Shmt1P50431 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shmt1P50431 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shmt1P50431 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shmt1P50431 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shmt1P50431 Gm23624-201ENSMUST00000082463 321 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Gm22864-201ENSMUST00000083950 130 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Shmt1P50431 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Shmt1P50431 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.15□□□□□ -1.42
Shmt1P50431 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.15□□□□□ -1.43
Shmt1P50431 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Shmt1P50431 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Shmt1P50431 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.15□□□□□ -1.43
Shmt1P50431 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Shmt1P50431 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.15□□□□□ -1.43
Shmt1P50431 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.15□□□□□ -1.43
Shmt1P50431 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Shmt1P50431 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.15□□□□□ -1.43
Shmt1P50431 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.15□□□□□ -1.43
Shmt1P50431 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.15□□□□□ -1.43
Shmt1P50431 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Shmt1P50431 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.15□□□□□ -1.43
Shmt1P50431 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Shmt1P50431 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Shmt1P50431 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Shmt1P50431 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Shmt1P50431 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Shmt1P50431 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Shmt1P50431 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Shmt1P50431 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms