Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Gm26925-201ENSMUST00000182470 957 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Cdx2P43241 Gm4322-201ENSMUST00000191094 336 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Gm20203-201ENSMUST00000192352 332 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Gm38040-201ENSMUST00000193505 225 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Gm42663-201ENSMUST00000199883 351 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Gm44259-201ENSMUST00000204996 298 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Gm4290-201ENSMUST00000206897 814 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Gm2607-201ENSMUST00000212389 627 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Gm16415-201ENSMUST00000080097 489 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdx2P43241 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdx2P43241 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdx2P43241 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm26376-201ENSMUST00000104784 110 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm11561-201ENSMUST00000117429 417 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Gm15120-201ENSMUST00000120602 301 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm22870-201ENSMUST00000157501 112 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Gm27148-201ENSMUST00000185086 160 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.13□□□□□ -1.59
Cdx2P43241 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm25147-201ENSMUST00000083030 105 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx2P43241 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.13□□□□□ -1.59
Cdx2P43241 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx2P43241 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.12□□□□□ -1.59
Cdx2P43241 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cdx2P43241 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx2P43241 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.12□□□□□ -1.59
Cdx2P43241 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Cdx2P43241 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx2P43241 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.12□□□□□ -1.59
Cdx2P43241 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx2P43241 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Cdx2P43241 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Cdx2P43241 Gm22266-201ENSMUST00000104011 138 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 Gm13311-201ENSMUST00000117863 379 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 Gm13679-201ENSMUST00000118678 484 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 Gm13213-201ENSMUST00000119668 474 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.12□□□□□ -1.59
Cdx2P43241 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx2P43241 Gm6081-201ENSMUST00000134472 489 ntBASIC5.12□□□□□ -1.59
Cdx2P43241 Gm16260-201ENSMUST00000155141 304 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms