Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37676-201ENSMUST00000195496 507 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Gm29778-201ENSMUST00000201667 466 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Gm45185-201ENSMUST00000207556 404 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.52□□□□□ -1.53
Lire1P11260 Gm45689-201ENSMUST00000210522 133 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.52□□□□□ -1.53
Lire1P11260 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.52□□□□□ -1.53
Lire1P11260 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lire1P11260 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lire1P11260 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.52□□□□□ -1.53
Lire1P11260 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.52□□□□□ -1.53
Lire1P11260 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Lire1P11260 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lire1P11260 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Lire1P11260 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Lire1P11260 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lire1P11260 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lire1P11260 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lire1P11260 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lire1P11260 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
Lire1P11260 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.52□□□□□ -1.53
Lire1P11260 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lire1P11260 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lire1P11260 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.52□□□□□ -1.53
Lire1P11260 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lire1P11260 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.51□□□□□ -1.53
Lire1P11260 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm12193-201ENSMUST00000117250 379 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm14621-201ENSMUST00000117709 689 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm14991-201ENSMUST00000119913 598 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm14515-201ENSMUST00000121327 216 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm11385-201ENSMUST00000121513 570 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm22210-201ENSMUST00000158101 144 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm27219-201ENSMUST00000184633 742 ntBASIC5.51□□□□□ -1.53
Lire1P11260 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm21715-201ENSMUST00000191056 694 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm28060-201ENSMUST00000191554 189 ntBASIC5.51□□□□□ -1.53
Lire1P11260 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm37477-201ENSMUST00000195215 884 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm43144-201ENSMUST00000198256 485 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm43946-201ENSMUST00000204058 886 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.51□□□□□ -1.53
Lire1P11260 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.51□□□□□ -1.53
Lire1P11260 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm7557-201ENSMUST00000221935 865 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.51□□□□□ -1.53
Lire1P11260 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Zfp429-203ENSMUST00000224684 524 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm6776-201ENSMUST00000057752 900 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lire1P11260 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lire1P11260 Snord59a-201ENSMUST00000082844 74 ntBASIC5.51□□□□□ -1.53
Lire1P11260 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Mir298-201ENSMUST00000083476 82 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lire1P11260 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.51□□□□□ -1.53
Lire1P11260 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Lire1P11260 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.51□□□□□ -1.53
Lire1P11260 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.51□□□□□ -1.53
Lire1P11260 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lire1P11260 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lire1P11260 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lire1P11260 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lire1P11260 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms