Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm33601-201ENSMUST00000210001 961 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm9269-201ENSMUST00000221661 578 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Snord59a-201ENSMUST00000082844 74 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Mir133b-201ENSMUST00000083546 119 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.78□□□□□ -1.48
Chmp6P0C0A3 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm16394-201ENSMUST00000117289 675 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm11677-201ENSMUST00000121349 977 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm23883-201ENSMUST00000122686 290 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm8941-201ENSMUST00000181451 899 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm28429-201ENSMUST00000188521 363 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm44221-201ENSMUST00000203552 388 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm19921-201ENSMUST00000210505 703 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm23330-201ENSMUST00000082660 164 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Smc5-206ENSMUST00000226111 3265 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Chmp6P0C0A3 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm23750-201ENSMUST00000104222 132 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm13451-201ENSMUST00000117649 592 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm24186-201ENSMUST00000157983 127 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28604-201ENSMUST00000186629 484 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28566-201ENSMUST00000186714 484 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms