Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Hmgb3O54879 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hmgb3O54879 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm23440-201ENSMUST00000104299 130 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm24886-201ENSMUST00000104384 123 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm13473-201ENSMUST00000119289 367 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm13367-201ENSMUST00000119955 796 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm14876-201ENSMUST00000120795 327 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm23354-201ENSMUST00000158426 104 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hmgb3O54879 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm24155-201ENSMUST00000175259 110 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm27754-201ENSMUST00000183340 126 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm27855-201ENSMUST00000184122 128 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm37430-201ENSMUST00000193039 196 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm3351-201ENSMUST00000193454 505 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm22897-202ENSMUST00000197782 127 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC4.23□□□□□ -1.73
Hmgb3O54879 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.23□□□□□ -1.73
Hmgb3O54879 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC4.23□□□□□ -1.73
Hmgb3O54879 AC163621.1-201ENSMUST00000220695 379 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hmgb3O54879 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm25134-201ENSMUST00000082646 160 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm22807-201ENSMUST00000082737 129 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hmgb3O54879 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm18716-201ENSMUST00000204507 1603 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Pramel-201ENSMUST00000118979 1383 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm22371-201ENSMUST00000104588 130 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm14711-201ENSMUST00000117056 217 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm11908-201ENSMUST00000117755 347 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm15772-201ENSMUST00000118533 438 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm11313-201ENSMUST00000118779 432 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm15781-201ENSMUST00000120216 323 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm8722-201ENSMUST00000121466 769 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm13724-201ENSMUST00000122395 1155 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm23855-201ENSMUST00000158377 135 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm25989-201ENSMUST00000158761 133 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm6264-201ENSMUST00000160802 624 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm22642-201ENSMUST00000175352 252 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm15256-201ENSMUST00000177793 883 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Mir7222-201ENSMUST00000183740 75 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm29519-201ENSMUST00000186994 398 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm36999-201ENSMUST00000192756 1046 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm42694-201ENSMUST00000196951 358 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm43105-201ENSMUST00000202987 459 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm31861-201ENSMUST00000204563 672 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm18587-201ENSMUST00000213736 841 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm19174-201ENSMUST00000216944 956 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 AC101205.1-201ENSMUST00000227916 907 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Mir7b-201ENSMUST00000083557 111 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms