Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm14103-201ENSMUST00000119075 366 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm14267-201ENSMUST00000119751 496 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm13991-201ENSMUST00000120190 648 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm15534-201ENSMUST00000137642 562 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm20637-201ENSMUST00000175715 462 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Mir6992-201ENSMUST00000183342 109 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm28149-201ENSMUST00000187102 378 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm28768-201ENSMUST00000189034 378 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm28384-201ENSMUST00000189079 463 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm2367-201ENSMUST00000192374 472 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm45382-201ENSMUST00000210607 151 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm18405-201ENSMUST00000220743 511 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm6863-201ENSMUST00000052882 636 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
H2afb3S4R1G7 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm23294-201ENSMUST00000104150 164 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm22499-201ENSMUST00000104501 135 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Snora35-201ENSMUST00000104579 128 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm7206-201ENSMUST00000117730 508 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm15754-201ENSMUST00000119191 478 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm14115-201ENSMUST00000119242 482 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm12307-201ENSMUST00000120581 590 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm15596-201ENSMUST00000121139 784 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm13531-201ENSMUST00000121893 543 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm25179-201ENSMUST00000122632 128 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm23059-201ENSMUST00000158978 107 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC5.2□□□□□ -1.58
H2afb3S4R1G7 Gm2619-202ENSMUST00000166777 651 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms