Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm23233-201ENSMUST00000157301 137 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm8582-201ENSMUST00000164061 789 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm6047-201ENSMUST00000167221 574 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm24949-201ENSMUST00000183609 215 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm27855-201ENSMUST00000184122 128 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Mir7674-201ENSMUST00000184964 63 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm38015-201ENSMUST00000193048 188 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm37072-201ENSMUST00000194570 837 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm2429-201ENSMUST00000194635 586 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm9317-201ENSMUST00000197055 862 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm43215-201ENSMUST00000199108 252 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm43054-201ENSMUST00000199495 884 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm43973-201ENSMUST00000203562 210 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm9202-201ENSMUST00000223036 437 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Zfp850-201ENSMUST00000099111 941 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm11774-201ENSMUST00000118601 293 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm14620-201ENSMUST00000120656 383 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm23774-201ENSMUST00000158990 131 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm10087-201ENSMUST00000167650 330 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm26993-201ENSMUST00000182766 789 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Mir7008-201ENSMUST00000184398 63 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm27409-201ENSMUST00000184727 80 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm28188-201ENSMUST00000190483 236 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm45789-201ENSMUST00000213038 364 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Mir331-201ENSMUST00000083673 96 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms