Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Gm4822-201ENSMUST00000077551 479 ntBASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Naip3-201ENSMUST00000118082 4208 ntBASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Tubb3Q9ERD7 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Mir466f-2-201ENSMUST00000104805 94 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm9836-201ENSMUST00000117132 216 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm11387-201ENSMUST00000120266 772 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm13118-201ENSMUST00000120402 549 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm12313-201ENSMUST00000121347 421 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm15057-201ENSMUST00000121516 534 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm23030-201ENSMUST00000158004 273 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm20480-201ENSMUST00000173953 250 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm22932-201ENSMUST00000175510 72 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Mir5110-201ENSMUST00000175537 87 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm6223-201ENSMUST00000178436 871 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm27037-201ENSMUST00000182270 960 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm27030-201ENSMUST00000182551 464 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm27715-201ENSMUST00000184714 260 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm37609-201ENSMUST00000191778 678 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm9931-201ENSMUST00000193584 1185 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm37987-201ENSMUST00000194999 825 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm5990-201ENSMUST00000203126 746 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm44088-201ENSMUST00000204595 237 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 CT010480.1-201ENSMUST00000223612 363 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.74□□□□□ -1.49
Tubb3Q9ERD7 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm8761-201ENSMUST00000121507 955 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm14970-201ENSMUST00000122289 355 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm26169-201ENSMUST00000158420 135 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Scarna10-201ENSMUST00000158992 325 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Gm17038-201ENSMUST00000166586 494 ntBASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.73□□□□□ -1.49
Tubb3Q9ERD7 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms