Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm24561-201ENSMUST00000175182 95 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm22420-201ENSMUST00000178795 126 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm8321-201ENSMUST00000181691 980 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm28017-201ENSMUST00000183434 126 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm29376-201ENSMUST00000189357 835 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm29664-201ENSMUST00000191125 463 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm42814-201ENSMUST00000199370 460 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm18325-201ENSMUST00000203228 835 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm24029-201ENSMUST00000083928 143 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Smc1aQ9CU62 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm12931-201ENSMUST00000117046 324 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm11908-201ENSMUST00000117755 347 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm13579-201ENSMUST00000118519 517 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm4989-201ENSMUST00000118711 749 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm14831-201ENSMUST00000120253 409 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm27225-201ENSMUST00000183833 557 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm42522-201ENSMUST00000196071 255 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm45249-201ENSMUST00000211021 348 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm8523-201ENSMUST00000211386 552 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Mir134-201ENSMUST00000083492 71 ntBASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Smc1aQ9CU62 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm14512-201ENSMUST00000117924 230 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm16200-201ENSMUST00000120385 331 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm9208-201ENSMUST00000120468 948 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm13363-201ENSMUST00000122008 522 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm22895-201ENSMUST00000157508 308 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm23799-201ENSMUST00000175559 120 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm37503-201ENSMUST00000192088 319 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm37700-201ENSMUST00000192617 965 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm43554-201ENSMUST00000199987 186 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm45082-201ENSMUST00000206082 601 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms