Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm23942-201ENSMUST00000101956 107 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm25093-201ENSMUST00000103993 132 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm25344-201ENSMUST00000104503 132 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm11920-201ENSMUST00000118491 563 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm15750-201ENSMUST00000120970 616 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm2892-201ENSMUST00000145537 711 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm24236-201ENSMUST00000157794 134 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm11107-201ENSMUST00000165414 505 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm7346-201ENSMUST00000169661 476 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm17060-201ENSMUST00000172394 824 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm25244-201ENSMUST00000178089 132 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Mir7005-201ENSMUST00000185089 69 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm19694-201ENSMUST00000192364 505 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm7496-201ENSMUST00000192573 1034 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm44361-201ENSMUST00000197960 94 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm31230-201ENSMUST00000199725 785 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm44003-201ENSMUST00000203024 490 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm43979-201ENSMUST00000203179 475 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm4556-201ENSMUST00000217808 355 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm18774-201ENSMUST00000218269 601 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm46364-201ENSMUST00000218548 319 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm3565-201ENSMUST00000222670 609 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm24036-201ENSMUST00000082868 156 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm8401-201ENSMUST00000120248 1739 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm28320-201ENSMUST00000187777 2273 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm13058-201ENSMUST00000117097 1435 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Gm15095-201ENSMUST00000118996 1430 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim11Q99PQ2 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.26□□□□□ -1.25
Trim11Q99PQ2 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm7269-201ENSMUST00000210819 1373 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Snord116l9-201ENSMUST00000101891 94 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm26504-201ENSMUST00000102033 94 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Mir669i-201ENSMUST00000117007 127 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm14887-201ENSMUST00000119522 663 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Amd-ps1-201ENSMUST00000120127 994 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm14125-202ENSMUST00000120921 756 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm12175-201ENSMUST00000122081 345 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm22452-201ENSMUST00000122804 104 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm7613-201ENSMUST00000139070 487 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm20690-201ENSMUST00000177341 315 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm22258-201ENSMUST00000177645 94 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm26502-201ENSMUST00000177732 94 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Snord116l13-201ENSMUST00000177737 94 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm25350-201ENSMUST00000177849 94 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Snord116l15-201ENSMUST00000177940 94 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Gm23446-201ENSMUST00000177977 94 ntBASIC7.25□□□□□ -1.25
Trim11Q99PQ2 Snord116l4-201ENSMUST00000177982 94 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms