Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Brf1Q8CFK2 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Brf1Q8CFK2 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Brf1Q8CFK2 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Brf1Q8CFK2 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.71□□□□□ -1.33
Brf1Q8CFK2 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Brf1Q8CFK2 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm15078-201ENSMUST00000118371 782 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm12303-201ENSMUST00000119506 673 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm14472-201ENSMUST00000119815 282 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm25102-201ENSMUST00000122479 112 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm23539-201ENSMUST00000157537 224 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm22518-201ENSMUST00000158267 68 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm23450-201ENSMUST00000178285 91 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm27148-201ENSMUST00000185086 160 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm44395-201ENSMUST00000197056 153 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm43456-201ENSMUST00000202519 457 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm4032-201ENSMUST00000210886 487 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Brf1Q8CFK2 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.71□□□□□ -1.34
Brf1Q8CFK2 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm42852-201ENSMUST00000202649 1379 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm22698-201ENSMUST00000175375 108 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm1972-201ENSMUST00000181606 964 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm27315-201ENSMUST00000183977 154 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm8419-201ENSMUST00000189886 412 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm38131-201ENSMUST00000192449 430 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Gm43136-201ENSMUST00000200403 636 ntBASIC6.7□□□□□ -1.34
Brf1Q8CFK2 Clec2j-202ENSMUST00000203658 606 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms