Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Mir546-201ENSMUST00000102105 121 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm11908-201ENSMUST00000117755 347 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm13013-201ENSMUST00000119087 523 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm14106-201ENSMUST00000119382 438 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm25291-201ENSMUST00000122795 144 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm22724-201ENSMUST00000158091 127 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm22326-201ENSMUST00000158897 351 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Scarna10-201ENSMUST00000158992 325 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm23872-201ENSMUST00000175432 77 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm25246-201ENSMUST00000175476 69 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm6223-201ENSMUST00000178436 871 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm26970-201ENSMUST00000182990 964 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm28996-201ENSMUST00000190316 721 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm37609-201ENSMUST00000191778 678 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm42579-201ENSMUST00000200512 734 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm6520-201ENSMUST00000200636 410 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm43973-201ENSMUST00000203562 210 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm45525-201ENSMUST00000210800 389 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm6906-201ENSMUST00000218014 569 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm18493-201ENSMUST00000192084 1612 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc40Q8BI79 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm14772-201ENSMUST00000116562 514 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm12131-201ENSMUST00000117479 359 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm11781-201ENSMUST00000118328 472 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm11774-201ENSMUST00000118601 293 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm14938-201ENSMUST00000119482 943 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm24402-201ENSMUST00000157873 91 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm18343-201ENSMUST00000172802 604 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm28640-201ENSMUST00000190918 550 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm37235-201ENSMUST00000195171 59 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm44360-201ENSMUST00000200081 82 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm8319-201ENSMUST00000205708 641 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 AV026068-224ENSMUST00000224827 928 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc40Q8BI79 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.71□□□□□ -1.49
Ccdc40Q8BI79 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc40Q8BI79 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc40Q8BI79 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms