Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scaf4Q6PFF0 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.15□□□□□ -1.43
Scaf4Q6PFF0 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scaf4Q6PFF0 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.15□□□□□ -1.43
Scaf4Q6PFF0 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Scaf4Q6PFF0 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.15□□□□□ -1.43
Scaf4Q6PFF0 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Mir190b-201ENSMUST00000104803 80 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm11876-201ENSMUST00000120002 269 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm4992-201ENSMUST00000120256 768 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm6142-201ENSMUST00000120290 325 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm6373-201ENSMUST00000121026 360 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm22533-201ENSMUST00000158821 274 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm16297-201ENSMUST00000161466 459 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm8550-201ENSMUST00000161621 653 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm24080-201ENSMUST00000175178 232 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm27006-201ENSMUST00000182218 943 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm27853-201ENSMUST00000184176 250 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm28956-201ENSMUST00000189047 427 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm37838-201ENSMUST00000194464 312 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm42804-201ENSMUST00000199701 178 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm7832-201ENSMUST00000202613 880 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm19617-201ENSMUST00000202977 308 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 AC139376.1-201ENSMUST00000220056 1250 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 AC165146.1-201ENSMUST00000223777 900 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm25404-201ENSMUST00000082970 107 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.14□□□□□ -1.43
Scaf4Q6PFF0 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm26146-201ENSMUST00000104478 185 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm2178-201ENSMUST00000104927 357 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm8692-201ENSMUST00000118102 438 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms