Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm14331-201ENSMUST00000120396 409 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Mir1903-201ENSMUST00000122574 80 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Mir1960-201ENSMUST00000157488 78 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm17366-201ENSMUST00000167629 187 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm5430-201ENSMUST00000182525 915 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm27460-201ENSMUST00000184213 100 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm6693-201ENSMUST00000189583 813 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm45269-201ENSMUST00000210359 282 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm45965-201ENSMUST00000221192 1284 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm18940-201ENSMUST00000222518 871 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 AC156790.3-201ENSMUST00000226200 254 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 AC107453.2-201ENSMUST00000227714 655 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm10221-201ENSMUST00000088299 309 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.79□□□□□ -1.48
Usp39Q3TIX9 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm15185-201ENSMUST00000117397 746 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm16200-201ENSMUST00000120385 331 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm16458-201ENSMUST00000121428 502 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm22895-201ENSMUST00000157508 308 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm26355-201ENSMUST00000158220 105 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Ear-ps10-201ENSMUST00000161871 460 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm2930-201ENSMUST00000170403 474 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm3242-201ENSMUST00000171273 485 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm22655-201ENSMUST00000174949 96 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm27854-201ENSMUST00000175578 244 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Mir7211-201ENSMUST00000184071 63 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 BC049739-201ENSMUST00000202626 660 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm5886-202ENSMUST00000203957 522 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm6850-201ENSMUST00000210031 530 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 AC163621.2-201ENSMUST00000222229 682 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Gm25586-201ENSMUST00000082499 112 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.78□□□□□ -1.48
Usp39Q3TIX9 Mir463-201ENSMUST00000093570 75 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms