Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mir6952-201ENSMUST00000185092 61 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm28661-201ENSMUST00000188231 681 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm20832-201ENSMUST00000189076 665 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ebf1Q07802 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm30638-201ENSMUST00000195570 656 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm36728-201ENSMUST00000195782 665 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Mir6906-201ENSMUST00000198998 58 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm43105-201ENSMUST00000202987 459 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm45185-201ENSMUST00000207556 404 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm9375-201ENSMUST00000208899 903 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm45850-201ENSMUST00000212536 338 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.34□□□□□ -1.39
Ebf1Q07802 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm9628-201ENSMUST00000222169 725 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.34□□□□□ -1.39
Ebf1Q07802 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ebf1Q07802 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ebf1Q07802 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ebf1Q07802 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm43613-201ENSMUST00000199409 1613 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ebf1Q07802 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ebf1Q07802 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.34□□□□□ -1.39
Ebf1Q07802 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ebf1Q07802 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ebf1Q07802 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ebf1Q07802 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
Ebf1Q07802 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ebf1Q07802 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 AC190403.1-201ENSMUST00000224515 1325 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm22952-201ENSMUST00000116720 120 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm13428-201ENSMUST00000117540 365 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm15078-201ENSMUST00000118371 782 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm12433-201ENSMUST00000119659 255 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm11385-201ENSMUST00000121513 570 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm12807-201ENSMUST00000121546 962 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm14589-201ENSMUST00000121640 727 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm26023-201ENSMUST00000122722 313 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm6245-201ENSMUST00000164699 768 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm7745-201ENSMUST00000182235 973 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC6.33□□□□□ -1.4
Ebf1Q07802 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm9236-201ENSMUST00000196892 587 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm19104-201ENSMUST00000198392 679 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm42652-201ENSMUST00000199073 614 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm42646-201ENSMUST00000202233 914 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm29817-201ENSMUST00000210098 172 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC6.33□□□□□ -1.4
Ebf1Q07802 Gm18592-201ENSMUST00000221529 276 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms