Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm24517-201ENSMUST00000122560 107 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.51□□□□□ -1.53
Col8a1Q00780 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm25722-201ENSMUST00000157498 279 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm23894-201ENSMUST00000158107 313 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm25717-201ENSMUST00000158631 353 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm17217-201ENSMUST00000166613 469 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Mir3572-201ENSMUST00000175549 86 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Mir6348-201ENSMUST00000183804 120 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm37884-201ENSMUST00000191857 818 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm44300-201ENSMUST00000196792 121 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm5853-201ENSMUST00000197183 632 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm43148-201ENSMUST00000198237 520 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm44023-201ENSMUST00000203710 469 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm5001-201ENSMUST00000204361 331 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.51□□□□□ -1.53
Col8a1Q00780 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm7570-201ENSMUST00000215246 698 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm46192-201ENSMUST00000217894 326 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm4921-201ENSMUST00000219804 992 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm25404-201ENSMUST00000082970 107 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm7676-201ENSMUST00000084055 319 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col8a1Q00780 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm42874-201ENSMUST00000198888 1774 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm3555-201ENSMUST00000160287 1395 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.51□□□□□ -1.53
Col8a1Q00780 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms