Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Trbv11-201ENSMUST00000194354 260 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm38120-201ENSMUST00000195506 4642 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm10652-201ENSMUST00000199790 2622 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 AC154239.1-201ENSMUST00000228565 406 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PrkdcP97313 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.53□□□□□ -1.85
PrkdcP97313 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
PrkdcP97313 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PrkdcP97313 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC3.53□□□□□ -1.85
PrkdcP97313 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PrkdcP97313 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PrkdcP97313 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm42615-201ENSMUST00000197704 1820 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm25726-201ENSMUST00000104529 129 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm12094-201ENSMUST00000121781 472 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm5558-201ENSMUST00000178933 495 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm20940-201ENSMUST00000197308 360 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm31306-201ENSMUST00000197517 508 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm44248-201ENSMUST00000203079 1549 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm42975-201ENSMUST00000200612 1491 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm12931-201ENSMUST00000117046 324 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm11617-201ENSMUST00000119609 639 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm21909-201ENSMUST00000178260 439 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC3.52□□□□□ -1.85
PrkdcP97313 AC142273.1-201ENSMUST00000213723 673 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
PrkdcP97313 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm45885-202ENSMUST00000211520 1383 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm16149-201ENSMUST00000117631 309 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm25066-201ENSMUST00000158145 123 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Mir1957b-201ENSMUST00000184608 123 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm8911-201ENSMUST00000213986 652 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm9309-201ENSMUST00000223537 546 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PrkdcP97313 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PrkdcP97313 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PrkdcP97313 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PrkdcP97313 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
PrkdcP97313 Gm37099-201ENSMUST00000191902 3451 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm42989-201ENSMUST00000200646 2306 ntBASIC3.52□□□□□ -1.85
PrkdcP97313 Gm44735-201ENSMUST00000206197 1752 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm11385-201ENSMUST00000121513 570 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.51□□□□□ -1.85
PrkdcP97313 Gm24520-201ENSMUST00000179510 110 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm27492-201ENSMUST00000185194 187 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm28468-201ENSMUST00000188536 615 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm18547-201ENSMUST00000192439 811 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 AC123067.1-201ENSMUST00000217711 462 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PrkdcP97313 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PrkdcP97313 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PrkdcP97313 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC3.51□□□□□ -1.85
PrkdcP97313 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
PrkdcP97313 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms