Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm29573-201ENSMUST00000190291 919 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm43350-201ENSMUST00000196382 711 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Igkv12-47-201ENSMUST00000196961 356 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Gm43367-201ENSMUST00000199986 625 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Gm5324-201ENSMUST00000208115 476 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Gm2961-201ENSMUST00000211074 772 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 AC165146.1-201ENSMUST00000223777 900 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 AL669819.1-201ENSMUST00000225143 330 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm26176-201ENSMUST00000083795 105 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Rfx1P48377 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm13928-201ENSMUST00000120326 1732 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Rfx1P48377 Gm45149-201ENSMUST00000206459 2172 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Gm43498-201ENSMUST00000202002 1486 ntBASIC7.49□□□□□ -1.21
Rfx1P48377 Gm44678-201ENSMUST00000207828 2775 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm22091-201ENSMUST00000116908 127 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm7421-201ENSMUST00000119298 639 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm5793-201ENSMUST00000119393 630 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm11252-201ENSMUST00000120572 939 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm14054-201ENSMUST00000120744 704 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm7365-201ENSMUST00000120877 639 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm22478-201ENSMUST00000122570 154 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm24359-201ENSMUST00000158418 221 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Rfx1P48377 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm29496-201ENSMUST00000189854 693 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm7867-201ENSMUST00000189856 546 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm29214-201ENSMUST00000190216 570 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm17895-201ENSMUST00000194028 874 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm18553-201ENSMUST00000194152 634 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Mir142-201ENSMUST00000198092 64 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm19092-201ENSMUST00000209036 969 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.48□□□□□ -1.21
Rfx1P48377 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm18228-201ENSMUST00000217297 1091 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms