Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC4.78□□□□□ -1.64
P20040 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Gm22116-201ENSMUST00000158791 141 ntBASIC4.78□□□□□ -1.64
P20040 Gm3008-201ENSMUST00000160566 571 ntBASIC4.78□□□□□ -1.64
P20040 Gm22122-201ENSMUST00000175147 200 ntBASIC4.78□□□□□ -1.64
P20040 Gm24407-201ENSMUST00000177864 141 ntBASIC4.78□□□□□ -1.64
P20040 Gm27409-201ENSMUST00000184727 80 ntBASIC4.78□□□□□ -1.64
P20040 Mir7674-201ENSMUST00000184964 63 ntBASIC4.78□□□□□ -1.64
P20040 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.78□□□□□ -1.64
P20040 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC4.78□□□□□ -1.64
P20040 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.78□□□□□ -1.64
P20040 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC4.78□□□□□ -1.64
P20040 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.78□□□□□ -1.64
P20040 Gm20940-201ENSMUST00000197308 360 ntBASIC4.78□□□□□ -1.64
P20040 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.78□□□□□ -1.64
P20040 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.78□□□□□ -1.64
P20040 Gm45026-201ENSMUST00000205292 833 ntBASIC4.78□□□□□ -1.64
P20040 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.78□□□□□ -1.64
P20040 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
P20040 Gm20786-201ENSMUST00000212649 436 ntBASIC4.78□□□□□ -1.64
P20040 Gm2099-201ENSMUST00000220979 412 ntBASIC4.78□□□□□ -1.64
P20040 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.78□□□□□ -1.64
P20040 AC166358.3-201ENSMUST00000221456 181 ntBASIC4.78□□□□□ -1.64
P20040 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.78□□□□□ -1.64
P20040 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.78□□□□□ -1.64
P20040 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.78□□□□□ -1.64
P20040 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.78□□□□□ -1.64
P20040 n-R5s36-201ENSMUST00000082998 119 ntBASIC4.78□□□□□ -1.64
P20040 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC4.78□□□□□ -1.64
P20040 AC121844.3-201ENSMUST00000219124 1785 ntBASIC4.78□□□□□ -1.64
P20040 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
P20040 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.78□□□□□ -1.64
P20040 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
P20040 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.77□□□□□ -1.65
P20040 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
P20040 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.77□□□□□ -1.65
P20040 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
P20040 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.77□□□□□ -1.65
P20040 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Gm11970-201ENSMUST00000116105 320 ntBASIC4.77□□□□□ -1.65
P20040 Gm12683-201ENSMUST00000117528 415 ntBASIC4.77□□□□□ -1.65
P20040 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Gm12222-201ENSMUST00000121368 260 ntBASIC4.77□□□□□ -1.65
P20040 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.77□□□□□ -1.65
P20040 Gm23233-201ENSMUST00000157301 137 ntBASIC4.77□□□□□ -1.65
P20040 Gm25433-201ENSMUST00000158283 286 ntBASIC4.77□□□□□ -1.65
P20040 Gm21999-201ENSMUST00000165985 387 ntBASIC4.77□□□□□ -1.65
P20040 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
P20040 Mir7008-201ENSMUST00000184398 63 ntBASIC4.77□□□□□ -1.65
P20040 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Mir6516-201ENSMUST00000196236 110 ntBASIC4.77□□□□□ -1.65
P20040 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
P20040 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Gm19880-201ENSMUST00000207731 318 ntBASIC4.77□□□□□ -1.65
P20040 Gm46192-201ENSMUST00000217894 326 ntBASIC4.77□□□□□ -1.65
P20040 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.77□□□□□ -1.65
P20040 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.77□□□□□ -1.65
P20040 Gm9202-201ENSMUST00000223036 437 ntBASIC4.77□□□□□ -1.65
P20040 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.77□□□□□ -1.65
P20040 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.77□□□□□ -1.65
P20040 AV026068-237ENSMUST00000226075 572 ntBASIC4.77□□□□□ -1.65
P20040 AC123665.4-201ENSMUST00000228790 249 ntBASIC4.77□□□□□ -1.65
P20040 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
P20040 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
P20040 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
P20040 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.77□□□□□ -1.65
P20040 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
P20040 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
P20040 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
P20040 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC4.76□□□□□ -1.65
P20040 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
P20040 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
P20040 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.76□□□□□ -1.65
P20040 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.76□□□□□ -1.65
P20040 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.76□□□□□ -1.65
P20040 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
P20040 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.76□□□□□ -1.65
P20040 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
P20040 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
P20040 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
P20040 Gm12303-201ENSMUST00000119506 673 ntBASIC4.76□□□□□ -1.65
P20040 Gm16200-201ENSMUST00000120385 331 ntBASIC4.76□□□□□ -1.65
P20040 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.76□□□□□ -1.65
P20040 Gm25048-201ENSMUST00000158598 91 ntBASIC4.76□□□□□ -1.65
P20040 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms