Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.76□□□□□ -1.49
Hoxd3P09027 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Gm23506-201ENSMUST00000083077 107 ntBASIC5.76□□□□□ -1.49
Hoxd3P09027 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hoxd3P09027 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hoxd3P09027 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Gm7842-201ENSMUST00000217691 1379 ntBASIC5.76□□□□□ -1.49
Hoxd3P09027 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Hoxd3P09027 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hoxd3P09027 Gm37520-201ENSMUST00000194883 2672 ntBASIC5.76□□□□□ -1.49
Hoxd3P09027 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hoxd3P09027 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hoxd3P09027 Gm42490-201ENSMUST00000198595 2064 ntBASIC5.76□□□□□ -1.49
Hoxd3P09027 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Hoxd3P09027 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Hoxd3P09027 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC5.76□□□□□ -1.49
Hoxd3P09027 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hoxd3P09027 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Hoxd3P09027 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Hoxd3P09027 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm43534-201ENSMUST00000197685 2853 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Snord72-201ENSMUST00000104549 81 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm7164-201ENSMUST00000117503 450 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm13082-201ENSMUST00000118877 561 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm12693-201ENSMUST00000121965 483 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm43723-201ENSMUST00000196886 189 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm22711-202ENSMUST00000197029 135 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm44265-201ENSMUST00000203631 465 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.75□□□□□ -1.49
Hoxd3P09027 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 AC164424.3-201ENSMUST00000220809 148 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 AC166358.8-201ENSMUST00000223288 105 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 AC124739.1-201ENSMUST00000223433 148 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm7731-201ENSMUST00000091759 470 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC5.75□□□□□ -1.49
Hoxd3P09027 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 AC122356.1-202ENSMUST00000227328 2758 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.75□□□□□ -1.49
Hoxd3P09027 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hoxd3P09027 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms