Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.65□□□□□ -1.5
TnfP06804 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.65□□□□□ -1.5
TnfP06804 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
TnfP06804 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TnfP06804 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.65□□□□□ -1.5
TnfP06804 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TnfP06804 Gm14659-201ENSMUST00000117667 843 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm17014-201ENSMUST00000120765 168 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm13007-201ENSMUST00000121866 365 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.65□□□□□ -1.5
TnfP06804 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TnfP06804 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TnfP06804 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TnfP06804 Mir5103-201ENSMUST00000175111 79 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 Mir6412-201ENSMUST00000184477 97 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.65□□□□□ -1.5
TnfP06804 Gm37719-201ENSMUST00000194615 292 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm43390-201ENSMUST00000196614 421 ntBASIC5.65□□□□□ -1.5
TnfP06804 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.65□□□□□ -1.5
TnfP06804 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm44184-201ENSMUST00000204290 132 ntBASIC5.65□□□□□ -1.5
TnfP06804 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.65□□□□□ -1.5
TnfP06804 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.65□□□□□ -1.5
TnfP06804 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
TnfP06804 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TnfP06804 Gm24706-201ENSMUST00000082806 137 ntBASIC5.65□□□□□ -1.5
TnfP06804 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
TnfP06804 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TnfP06804 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.65□□□□□ -1.51
TnfP06804 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.65□□□□□ -1.51
TnfP06804 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TnfP06804 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TnfP06804 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TnfP06804 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TnfP06804 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TnfP06804 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
TnfP06804 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TnfP06804 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TnfP06804 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TnfP06804 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TnfP06804 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TnfP06804 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 Gm11912-201ENSMUST00000117235 264 ntBASIC5.64□□□□□ -1.51
TnfP06804 Gm13367-201ENSMUST00000119955 796 ntBASIC5.64□□□□□ -1.51
TnfP06804 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.64□□□□□ -1.51
TnfP06804 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.64□□□□□ -1.51
TnfP06804 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 Gm25389-201ENSMUST00000157340 286 ntBASIC5.64□□□□□ -1.51
TnfP06804 Gm7316-201ENSMUST00000165395 445 ntBASIC5.64□□□□□ -1.51
TnfP06804 Gm26925-201ENSMUST00000182470 957 ntBASIC5.64□□□□□ -1.51
TnfP06804 Gm27543-201ENSMUST00000183562 177 ntBASIC5.64□□□□□ -1.51
TnfP06804 Mir7012-201ENSMUST00000183900 64 ntBASIC5.64□□□□□ -1.51
TnfP06804 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 Gm44776-201ENSMUST00000207212 381 ntBASIC5.64□□□□□ -1.51
TnfP06804 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TnfP06804 Gm19921-201ENSMUST00000210505 703 ntBASIC5.64□□□□□ -1.51
TnfP06804 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.64□□□□□ -1.51
TnfP06804 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TnfP06804 Gm24763-201ENSMUST00000083688 190 ntBASIC5.64□□□□□ -1.51
TnfP06804 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TnfP06804 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TnfP06804 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.64□□□□□ -1.51
TnfP06804 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
TnfP06804 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.64□□□□□ -1.51
TnfP06804 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TnfP06804 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.64□□□□□ -1.51
TnfP06804 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TnfP06804 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TnfP06804 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.64□□□□□ -1.51
TnfP06804 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.64□□□□□ -1.51
TnfP06804 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TnfP06804 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TnfP06804 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TnfP06804 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TnfP06804 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.63□□□□□ -1.51
TnfP06804 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.63□□□□□ -1.51
TnfP06804 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TnfP06804 Gm23593-201ENSMUST00000104309 120 ntBASIC5.63□□□□□ -1.51
TnfP06804 Gm15786-201ENSMUST00000121079 450 ntBASIC5.63□□□□□ -1.51
TnfP06804 Gm12422-201ENSMUST00000121431 302 ntBASIC5.63□□□□□ -1.51
TnfP06804 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms