Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm24235-201ENSMUST00000104319 129 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm12303-201ENSMUST00000119506 673 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm13121-201ENSMUST00000120637 632 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm23027-201ENSMUST00000158771 158 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm26993-201ENSMUST00000182766 789 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Mir7005-201ENSMUST00000185089 69 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 AC104906.1-201ENSMUST00000218122 913 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC4.25□□□□□ -1.73
Hmgb3O54879 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Olfr192-201ENSMUST00000080251 925 ntBASIC4.25□□□□□ -1.73
Hmgb3O54879 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmgb3O54879 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.25□□□□□ -1.73
Hmgb3O54879 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Hmgb3O54879 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm15078-201ENSMUST00000118371 782 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC4.24□□□□□ -1.73
Hmgb3O54879 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm15257-201ENSMUST00000177680 883 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm15252-201ENSMUST00000177750 883 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm24303-201ENSMUST00000178237 126 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm21909-201ENSMUST00000178260 439 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm15260-201ENSMUST00000179402 883 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm27030-201ENSMUST00000182551 464 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm21877-201ENSMUST00000185640 694 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm38011-201ENSMUST00000193312 279 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 AC117240.1-201ENSMUST00000199436 61 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm44623-201ENSMUST00000207934 434 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC4.24□□□□□ -1.73
Hmgb3O54879 CU024910.1-201ENSMUST00000214310 418 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm18997-201ENSMUST00000216353 822 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 AC153961.1-201ENSMUST00000217760 385 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 AL837512.1-201ENSMUST00000223914 1073 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 AC102676.1-201ENSMUST00000228131 719 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.24□□□□□ -1.73
Hmgb3O54879 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Hmgb3O54879 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hmgb3O54879 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.24□□□□□ -1.73
Hmgb3O54879 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.23□□□□□ -1.73
Hmgb3O54879 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hmgb3O54879 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms