Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a4A2AX52 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a4A2AX52 Gm6872-201ENSMUST00000165001 700 ntBASIC4.47□□□□□ -1.69
Col6a4A2AX52 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Col6a4A2AX52 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.47□□□□□ -1.69
Col6a4A2AX52 Gm44243-201ENSMUST00000204323 692 ntBASIC4.47□□□□□ -1.69
Col6a4A2AX52 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
Col6a4A2AX52 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.47□□□□□ -1.69
Col6a4A2AX52 Gm10540-201ENSMUST00000097581 276 ntBASIC4.47□□□□□ -1.69
Col6a4A2AX52 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a4A2AX52 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a4A2AX52 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col6a4A2AX52 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a4A2AX52 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm22468-201ENSMUST00000116680 120 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm26248-201ENSMUST00000116700 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm26137-201ENSMUST00000116701 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm26190-201ENSMUST00000116704 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm24617-201ENSMUST00000116705 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm25778-201ENSMUST00000116713 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm25774-201ENSMUST00000116717 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm22102-201ENSMUST00000116730 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm23177-201ENSMUST00000116784 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm24193-201ENSMUST00000116801 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm24744-201ENSMUST00000116833 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm24427-201ENSMUST00000116896 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm22346-201ENSMUST00000116918 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm23606-201ENSMUST00000116938 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm22029-201ENSMUST00000116940 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm26298-201ENSMUST00000116956 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm23844-201ENSMUST00000116959 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm24484-201ENSMUST00000117009 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm25347-201ENSMUST00000117026 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm22112-201ENSMUST00000117032 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm11561-201ENSMUST00000117429 417 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm15238-201ENSMUST00000119938 1296 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm22991-201ENSMUST00000178126 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm25754-201ENSMUST00000178653 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm22419-201ENSMUST00000178780 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm24802-201ENSMUST00000178897 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm25208-201ENSMUST00000178964 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm24567-201ENSMUST00000179294 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm23943-201ENSMUST00000179712 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm25228-201ENSMUST00000180121 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm23304-201ENSMUST00000180209 121 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm37336-202ENSMUST00000193705 468 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm20056-201ENSMUST00000194813 519 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.46□□□□□ -1.69
Col6a4A2AX52 Gm6362-201ENSMUST00000217686 836 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.46□□□□□ -1.69
Col6a4A2AX52 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Col6a4A2AX52 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Col6a4A2AX52 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col6a4A2AX52 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col6a4A2AX52 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Col6a4A2AX52 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 AC154630.1-201ENSMUST00000215334 2440 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Mir1193-201ENSMUST00000116761 121 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm12190-201ENSMUST00000120001 187 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm23171-201ENSMUST00000157159 264 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm27148-201ENSMUST00000185086 160 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm37152-201ENSMUST00000193369 1175 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 AC154642.2-201ENSMUST00000223657 2485 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.46□□□□□ -1.7
Col6a4A2AX52 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms