Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm12768-201ENSMUST00000120055 759 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm11825-201ENSMUST00000120710 736 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm14603-201ENSMUST00000121275 448 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm25660-201ENSMUST00000158470 104 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm24175-201ENSMUST00000158931 129 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm17046-201ENSMUST00000168078 850 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm9202-201ENSMUST00000223036 437 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Mir331-201ENSMUST00000083673 96 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.28□□□□□ -1.56
H2afb2S4R1M3 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm14769-201ENSMUST00000118590 432 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm14985-201ENSMUST00000118693 786 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm15490-201ENSMUST00000119894 387 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm13367-201ENSMUST00000119955 796 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm5383-201ENSMUST00000121177 617 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Mir1970-201ENSMUST00000157839 104 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm26086-201ENSMUST00000157902 263 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm27820-201ENSMUST00000183628 175 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm18969-201ENSMUST00000189423 730 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm5734-201ENSMUST00000189787 913 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm29755-201ENSMUST00000196976 948 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm38670-201ENSMUST00000199248 77 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm6850-201ENSMUST00000210031 530 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm19195-201ENSMUST00000222018 511 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm25139-201ENSMUST00000083247 210 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb2S4R1M3 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Gm14220-201ENSMUST00000118114 449 ntBASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Gm15428-201ENSMUST00000121352 333 ntBASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Gm22804-201ENSMUST00000158052 101 ntBASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Gm36939-201ENSMUST00000194889 439 ntBASIC5.26□□□□□ -1.57
H2afb2S4R1M3 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms