Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lima1Q9ERG0 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm22953-201ENSMUST00000116724 101 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm3931-201ENSMUST00000119038 455 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm23224-201ENSMUST00000158122 271 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm16557-201ENSMUST00000159182 191 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm19095-201ENSMUST00000220533 730 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Snora44-201ENSMUST00000082670 129 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm22807-201ENSMUST00000082737 129 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lima1Q9ERG0 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm15772-201ENSMUST00000118533 438 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm16200-201ENSMUST00000120385 331 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm13121-201ENSMUST00000120637 632 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm24383-201ENSMUST00000122691 333 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm24343-201ENSMUST00000158708 111 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm24175-201ENSMUST00000158931 129 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm20519-201ENSMUST00000173684 359 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm5946-201ENSMUST00000182340 970 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Mir7072-201ENSMUST00000184542 60 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm28507-201ENSMUST00000189737 703 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Mir219c-201ENSMUST00000199860 60 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm17988-201ENSMUST00000208796 535 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm18996-201ENSMUST00000214851 755 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms