Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm22194-201ENSMUST00000116869 95 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm11774-201ENSMUST00000118601 293 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm11679-201ENSMUST00000121830 779 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm25824-201ENSMUST00000157092 121 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm22916-201ENSMUST00000157616 119 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Scarna10-201ENSMUST00000158992 325 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm3170-201ENSMUST00000168753 850 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm3348-201ENSMUST00000177813 850 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm6223-201ENSMUST00000178436 871 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm22420-201ENSMUST00000178795 126 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm28017-201ENSMUST00000183434 126 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm28429-201ENSMUST00000188521 363 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm18702-201ENSMUST00000196923 588 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm44134-202ENSMUST00000204777 545 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm18587-201ENSMUST00000213736 841 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm19174-201ENSMUST00000216944 956 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.07□□□□□ -1.6
Cdc40Q9DC48 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm11826-201ENSMUST00000118781 438 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm15490-201ENSMUST00000119894 387 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm12074-201ENSMUST00000120189 219 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm22106-201ENSMUST00000122544 127 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm22895-201ENSMUST00000157508 308 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm23774-201ENSMUST00000158990 131 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm3216-201ENSMUST00000166927 486 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm3141-201ENSMUST00000168726 499 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Mir6417-201ENSMUST00000183815 116 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm43724-201ENSMUST00000197516 226 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm43554-201ENSMUST00000199987 186 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms