Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Gm22266-201ENSMUST00000104011 138 ntBASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Gm13533-201ENSMUST00000121104 177 ntBASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rpa3Q9CQ71 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Rpa3Q9CQ71 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.52
Rpa3Q9CQ71 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.59□□□□□ -1.52
Rpa3Q9CQ71 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Rpa3Q9CQ71 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Smc5-206ENSMUST00000226111 3265 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm23750-201ENSMUST00000104222 132 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm15073-201ENSMUST00000117432 634 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm14769-201ENSMUST00000118590 432 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm11975-201ENSMUST00000118772 481 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm15803-201ENSMUST00000120118 394 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm8256-201ENSMUST00000169178 453 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm27541-201ENSMUST00000184078 122 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm28883-201ENSMUST00000189256 369 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm19231-201ENSMUST00000193212 830 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.58□□□□□ -1.52
Rpa3Q9CQ71 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm23593-201ENSMUST00000104309 120 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm24235-201ENSMUST00000104319 129 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm11484-201ENSMUST00000119808 338 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm22596-201ENSMUST00000157601 316 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm27225-201ENSMUST00000183833 557 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm27985-201ENSMUST00000185112 378 ntBASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa3Q9CQ71 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms