Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm43162-201ENSMUST00000198292 1770 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm22266-201ENSMUST00000104011 138 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Mir879-201ENSMUST00000104703 76 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm12717-201ENSMUST00000118427 983 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm14769-201ENSMUST00000118590 432 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm13121-201ENSMUST00000120637 632 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm12332-201ENSMUST00000121397 922 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm8761-201ENSMUST00000121507 955 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm15618-201ENSMUST00000121610 452 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm23069-201ENSMUST00000158240 311 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm4134-201ENSMUST00000173244 563 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm20530-201ENSMUST00000174261 254 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Ighv1-29-201ENSMUST00000194116 342 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm19060-201ENSMUST00000201959 421 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm44261-201ENSMUST00000203337 209 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 AC163631.1-201ENSMUST00000225041 598 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm23508-201ENSMUST00000083079 72 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Nup35Q8R4R6 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.21□□□□□ -1.73
Nup35Q8R4R6 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Nup35Q8R4R6 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm13428-201ENSMUST00000117540 365 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm14805-201ENSMUST00000120172 340 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm5699-201ENSMUST00000152491 723 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm6542-201ENSMUST00000153606 772 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm22636-201ENSMUST00000158142 275 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm26404-201ENSMUST00000158498 109 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm24682-201ENSMUST00000158764 137 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm37871-201ENSMUST00000194973 688 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm43036-201ENSMUST00000200594 373 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 AC159205.4-201ENSMUST00000225964 704 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Nup35Q8R4R6 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nup35Q8R4R6 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms