Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm18541-201ENSMUST00000215935 538 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 AC147615.1-201ENSMUST00000218914 441 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Gm19195-201ENSMUST00000222018 511 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 CT025552.1-201ENSMUST00000224561 521 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm13245-201ENSMUST00000119646 260 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm23211-201ENSMUST00000122717 308 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm25430-201ENSMUST00000157614 289 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm5946-201ENSMUST00000182340 970 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm18802-201ENSMUST00000186270 888 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm37996-201ENSMUST00000191859 367 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm36939-201ENSMUST00000194889 439 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm6057-201ENSMUST00000195927 314 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm35648-201ENSMUST00000202304 475 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm44673-201ENSMUST00000205692 996 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm4587-201ENSMUST00000209135 637 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm2961-201ENSMUST00000211074 772 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Gm3213-201ENSMUST00000219296 441 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Prpf39Q8K2Z2 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Prpf39Q8K2Z2 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Prpf39Q8K2Z2 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.65□□□□□ -1.51
Prpf39Q8K2Z2 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Prpf39Q8K2Z2 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.65□□□□□ -1.51
Prpf39Q8K2Z2 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.65□□□□□ -1.51
Prpf39Q8K2Z2 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.65□□□□□ -1.51
Prpf39Q8K2Z2 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm13681-201ENSMUST00000117925 210 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm12768-201ENSMUST00000120055 759 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm12110-201ENSMUST00000121601 579 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm8582-201ENSMUST00000164061 789 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm8993-201ENSMUST00000182182 983 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm7266-201ENSMUST00000187999 405 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm4322-201ENSMUST00000191094 336 ntBASIC5.64□□□□□ -1.51
Prpf39Q8K2Z2 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms