Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm11447-201ENSMUST00000118983 858 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm12988-201ENSMUST00000119054 478 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm11835-201ENSMUST00000120635 663 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm23030-201ENSMUST00000158004 273 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm23224-201ENSMUST00000158122 271 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm25839-201ENSMUST00000158921 103 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm7152-201ENSMUST00000163570 605 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm6872-201ENSMUST00000165001 700 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm22923-201ENSMUST00000174952 110 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm38181-201ENSMUST00000181357 720 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Mir6921-201ENSMUST00000183719 80 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm27602-201ENSMUST00000183861 111 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm18342-201ENSMUST00000186987 694 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm28917-201ENSMUST00000187294 237 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm2427-201ENSMUST00000189121 881 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm28766-201ENSMUST00000191086 234 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm37187-201ENSMUST00000193425 341 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm37375-201ENSMUST00000193859 387 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm37385-201ENSMUST00000195223 387 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm42522-201ENSMUST00000196071 255 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm43798-201ENSMUST00000202056 394 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm34149-201ENSMUST00000203547 304 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm44665-201ENSMUST00000205381 251 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm19233-201ENSMUST00000219772 936 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 AC121542.1-201ENSMUST00000227245 721 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.73□□□□□ -1.33
Brf1Q8CFK2 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brf1Q8CFK2 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm11826-201ENSMUST00000118781 438 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm6223-201ENSMUST00000178436 871 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm27887-201ENSMUST00000184367 102 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm42454-201ENSMUST00000196805 1181 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm43078-201ENSMUST00000197222 168 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm43655-201ENSMUST00000197367 222 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm44539-201ENSMUST00000206010 238 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm44571-201ENSMUST00000208092 533 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm45870-201ENSMUST00000211269 601 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 AC163664.1-201ENSMUST00000226251 1248 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Ube2nl-201ENSMUST00000085228 456 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.72□□□□□ -1.33
Brf1Q8CFK2 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms