Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm5139-201ENSMUST00000175943 249 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm18350-201ENSMUST00000187395 955 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm43078-201ENSMUST00000197222 168 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm43629-201ENSMUST00000201782 704 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm35648-201ENSMUST00000202304 475 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm4874-201ENSMUST00000203589 691 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm19880-201ENSMUST00000207731 318 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm7676-201ENSMUST00000084055 319 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 BC055308-201ENSMUST00000193380 2538 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup88Q8CEC0 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm14520-201ENSMUST00000119258 387 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm16200-201ENSMUST00000120385 331 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm13259-201ENSMUST00000120792 456 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm12267-201ENSMUST00000121609 761 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm23806-201ENSMUST00000175157 109 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm3307-201ENSMUST00000176164 632 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm8993-201ENSMUST00000182182 983 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm27355-201ENSMUST00000185045 128 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm18553-201ENSMUST00000194152 634 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm18325-201ENSMUST00000203228 835 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm19174-201ENSMUST00000216944 956 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.37□□□□□ -1.39
Nup88Q8CEC0 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm42860-201ENSMUST00000196492 3991 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm6134-201ENSMUST00000117265 171 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm14472-201ENSMUST00000119815 282 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm14620-201ENSMUST00000120656 383 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms