Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ccdc38Q8CDN8 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc38Q8CDN8 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.09□□□□□ -1.43
Ccdc38Q8CDN8 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Ccdc38Q8CDN8 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc38Q8CDN8 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc38Q8CDN8 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm38259-201ENSMUST00000194602 3534 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm8993-201ENSMUST00000182182 983 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm28640-201ENSMUST00000190918 550 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm9317-201ENSMUST00000197055 862 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm44307-201ENSMUST00000204466 764 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm6362-201ENSMUST00000217686 836 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm25134-201ENSMUST00000082646 160 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm22807-201ENSMUST00000082737 129 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm8674-201ENSMUST00000179367 3047 ntBASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc38Q8CDN8 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm43462-201ENSMUST00000200265 3648 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm13013-201ENSMUST00000119087 523 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm17152-201ENSMUST00000172430 535 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm27653-201ENSMUST00000185037 136 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm38166-201ENSMUST00000191660 471 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm43078-201ENSMUST00000197222 168 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm7733-201ENSMUST00000199038 919 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm2040-201ENSMUST00000202979 289 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm4874-201ENSMUST00000203589 691 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm44214-201ENSMUST00000204153 606 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm4374-201ENSMUST00000204929 424 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm4587-201ENSMUST00000209135 637 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 AC117237.1-201ENSMUST00000224035 395 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm7117-201ENSMUST00000071515 387 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.07□□□□□ -1.44
Ccdc38Q8CDN8 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms