Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm37631-201ENSMUST00000192275 364 ntBASIC7.48□□□□□ -1.21
Usp47Q8BY87 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC7.48□□□□□ -1.21
Usp47Q8BY87 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Gm9577-201ENSMUST00000174655 2620 ntBASIC7.48□□□□□ -1.21
Usp47Q8BY87 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.48□□□□□ -1.21
Usp47Q8BY87 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Gm37766-201ENSMUST00000192244 2567 ntBASIC7.48□□□□□ -1.21
Usp47Q8BY87 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Usp47Q8BY87 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm12287-201ENSMUST00000119770 707 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm17014-201ENSMUST00000120765 168 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 n-R5s98-201ENSMUST00000122549 119 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm5699-201ENSMUST00000152491 723 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm27528-201ENSMUST00000183544 205 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm9038-201ENSMUST00000203400 604 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Mir27a-201ENSMUST00000083510 87 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm24763-201ENSMUST00000083688 190 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm43229-201ENSMUST00000201812 1850 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Smc5-206ENSMUST00000226111 3265 ntBASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Usp47Q8BY87 Gm16089-201ENSMUST00000117679 336 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 Gm13679-201ENSMUST00000118678 484 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 H3f3c-201ENSMUST00000119459 411 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 Gm14125-202ENSMUST00000120921 756 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 Gm26318-201ENSMUST00000176507 96 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC7.46□□□□□ -1.21
Usp47Q8BY87 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC7.46□□□□□ -1.21
Usp47Q8BY87 Gm2099-201ENSMUST00000220979 412 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC7.46□□□□□ -1.21
Usp47Q8BY87 AC153153.2-201ENSMUST00000223572 411 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 Gm22741-201ENSMUST00000083438 165 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC7.46□□□□□ -1.21
Usp47Q8BY87 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Usp47Q8BY87 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Usp47Q8BY87 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Usp47Q8BY87 AC151734.1-201ENSMUST00000227023 1740 ntBASIC7.46□□□□□ -1.21
Usp47Q8BY87 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Usp47Q8BY87 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC7.46□□□□□ -1.21
Usp47Q8BY87 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC7.46□□□□□ -1.21
Usp47Q8BY87 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Usp47Q8BY87 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Gm6542-201ENSMUST00000153606 772 ntBASIC7.46□□□□□ -1.22
Usp47Q8BY87 Gm23537-201ENSMUST00000157536 330 ntBASIC7.46□□□□□ -1.22
Usp47Q8BY87 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC7.46□□□□□ -1.22
Usp47Q8BY87 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 AC161114.1-201ENSMUST00000218223 474 ntBASIC7.46□□□□□ -1.22
Usp47Q8BY87 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC7.46□□□□□ -1.22
Usp47Q8BY87 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC7.46□□□□□ -1.22
Usp47Q8BY87 Gm40598-201ENSMUST00000222953 547 ntBASIC7.46□□□□□ -1.22
Usp47Q8BY87 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Usp47Q8BY87 AC117608.2-201ENSMUST00000224124 1363 ntBASIC7.45□□□□□ -1.22
Usp47Q8BY87 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Gm29293-201ENSMUST00000189416 2188 ntBASIC7.45□□□□□ -1.22
Usp47Q8BY87 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Usp47Q8BY87 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms