Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm13488-201ENSMUST00000120419 179 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm14601-201ENSMUST00000120892 236 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Mir8097-201ENSMUST00000185150 119 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm21489-201ENSMUST00000189668 818 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm20819-201ENSMUST00000191091 925 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm44580-201ENSMUST00000206333 877 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm44909-201ENSMUST00000208756 165 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm3213-201ENSMUST00000219296 441 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 AC192616.1-201ENSMUST00000221922 132 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 AC131745.2-201ENSMUST00000225736 565 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Mir449a-201ENSMUST00000083641 91 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 AC169038.1-201ENSMUST00000227378 1352 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp40Q8BWR4 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 AC118639.1-203ENSMUST00000228425 2016 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm25758-201ENSMUST00000103987 129 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm14358-201ENSMUST00000118458 403 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm14998-201ENSMUST00000120502 495 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm11350-201ENSMUST00000121436 870 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm13676-201ENSMUST00000122185 591 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm17655-201ENSMUST00000167969 255 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm18396-201ENSMUST00000177095 361 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm8321-201ENSMUST00000181691 980 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm38214-201ENSMUST00000192581 988 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm37993-201ENSMUST00000195301 988 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm43245-201ENSMUST00000197603 468 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm9278-201ENSMUST00000205508 553 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm44603-201ENSMUST00000206820 367 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm4290-201ENSMUST00000206897 814 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 AC129085.4-201ENSMUST00000224536 570 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 AC131117.2-203ENSMUST00000225886 950 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 AC154436.2-201ENSMUST00000227408 208 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Mir350-201ENSMUST00000083639 99 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm7676-201ENSMUST00000084055 319 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Gm42540-201ENSMUST00000200319 2008 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 CT025604.1-201ENSMUST00000221111 3436 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 AC132852.1-201ENSMUST00000214683 2324 ntBASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp40Q8BWR4 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms