Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm20615-201ENSMUST00000177503 705 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Mir6361-201ENSMUST00000185079 101 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm38131-201ENSMUST00000192449 430 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm17824-201ENSMUST00000197690 805 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 CT025680.1-201ENSMUST00000217375 375 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 AC155941.1-201ENSMUST00000220223 529 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 AC123656.1-201ENSMUST00000227121 581 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm23628-201ENSMUST00000082464 173 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm25141-201ENSMUST00000083177 107 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 AC139750.1-201ENSMUST00000223962 1300 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Gm18880-201ENSMUST00000223333 1541 ntBASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim41Q5NCC3 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm14613-201ENSMUST00000122239 752 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm17366-201ENSMUST00000167629 187 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm27313-201ENSMUST00000183500 142 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm28620-201ENSMUST00000190463 439 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm37119-201ENSMUST00000195691 389 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 AC116589.7-201ENSMUST00000221061 239 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 AC164117.1-201ENSMUST00000221726 239 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 AC122858.3-201ENSMUST00000226341 740 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 AC158954.1-201ENSMUST00000228272 1006 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Olfr467-201ENSMUST00000084756 927 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Gm8276-201ENSMUST00000192231 1812 ntBASIC11.79□□□□□ -0.52
Trim41Q5NCC3 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trim41Q5NCC3 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm25316-201ENSMUST00000116826 118 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm13808-201ENSMUST00000121353 184 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm25675-201ENSMUST00000174979 118 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm22690-201ENSMUST00000175054 110 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Mir199b-201ENSMUST00000175066 110 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm43383-201ENSMUST00000195981 469 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm6702-201ENSMUST00000208496 471 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm45874-201ENSMUST00000212423 346 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm36501-201ENSMUST00000221857 745 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Gm33312-201ENSMUST00000222443 332 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 CT025552.2-201ENSMUST00000225497 317 ntBASIC11.78□□□□□ -0.52
Trim41Q5NCC3 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim41Q5NCC3 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms