Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Mir323-201ENSMUST00000083683 86 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm14324-201ENSMUST00000121358 3051 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Mir546-201ENSMUST00000102105 121 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm24792-201ENSMUST00000104286 128 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Mir5710-201ENSMUST00000176884 69 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm28471-201ENSMUST00000185994 615 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm6009-201ENSMUST00000210848 280 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PrkdcP97313 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC3.54□□□□□ -1.84
PrkdcP97313 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PrkdcP97313 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm29479-201ENSMUST00000190352 455 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC3.54□□□□□ -1.84
PrkdcP97313 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 n-R5s167-201ENSMUST00000083227 121 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm44777-201ENSMUST00000205941 4052 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PrkdcP97313 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PrkdcP97313 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PrkdcP97313 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm37435-201ENSMUST00000192078 3947 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.54□□□□□ -1.84
PrkdcP97313 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC3.54□□□□□ -1.84
PrkdcP97313 Gm15583-201ENSMUST00000116191 3510 ntBASIC3.54□□□□□ -1.84
PrkdcP97313 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PrkdcP97313 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm7919-201ENSMUST00000202043 1389 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
PrkdcP97313 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm16394-201ENSMUST00000117289 675 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm23945-201ENSMUST00000179609 92 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.53□□□□□ -1.84
PrkdcP97313 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
PrkdcP97313 AC133910.1-201ENSMUST00000228128 624 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm42496-201ENSMUST00000197976 3241 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
PrkdcP97313 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PrkdcP97313 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PrkdcP97313 AC120347.1-201ENSMUST00000223326 1639 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 AC159244.3-201ENSMUST00000222887 3153 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm22473-201ENSMUST00000104114 132 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Gm13501-201ENSMUST00000118477 979 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Gm6079-201ENSMUST00000121356 404 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.53□□□□□ -1.84
PrkdcP97313 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PrkdcP97313 Gm30280-201ENSMUST00000192214 262 ntBASIC3.53□□□□□ -1.84
PrkdcP97313 Gm17952-201ENSMUST00000193914 747 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms