Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm21959-201ENSMUST00000178439 452 ntBASIC5.22□□□□□ -1.57
RoraP51448 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RoraP51448 Gm28429-201ENSMUST00000188521 363 ntBASIC5.22□□□□□ -1.57
RoraP51448 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.22□□□□□ -1.57
RoraP51448 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.22□□□□□ -1.57
RoraP51448 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RoraP51448 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.22□□□□□ -1.57
RoraP51448 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.22□□□□□ -1.57
RoraP51448 Clec2j-202ENSMUST00000203658 606 ntBASIC5.22□□□□□ -1.57
RoraP51448 Gm4587-201ENSMUST00000209135 637 ntBASIC5.22□□□□□ -1.57
RoraP51448 Gm18205-201ENSMUST00000209215 841 ntBASIC5.22□□□□□ -1.57
RoraP51448 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.22□□□□□ -1.57
RoraP51448 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RoraP51448 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.22□□□□□ -1.57
RoraP51448 Gm6474-201ENSMUST00000223250 699 ntBASIC5.22□□□□□ -1.57
RoraP51448 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.22□□□□□ -1.57
RoraP51448 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.22□□□□□ -1.57
RoraP51448 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.22□□□□□ -1.57
RoraP51448 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RoraP51448 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RoraP51448 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RoraP51448 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RoraP51448 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RoraP51448 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.22□□□□□ -1.57
RoraP51448 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
RoraP51448 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.22□□□□□ -1.57
RoraP51448 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RoraP51448 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RoraP51448 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.21□□□□□ -1.57
RoraP51448 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.21□□□□□ -1.57
RoraP51448 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.21□□□□□ -1.57
RoraP51448 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.21□□□□□ -1.57
RoraP51448 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
RoraP51448 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RoraP51448 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RoraP51448 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RoraP51448 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RoraP51448 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RoraP51448 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.21□□□□□ -1.58
RoraP51448 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
RoraP51448 Gm25758-201ENSMUST00000103987 129 ntBASIC5.21□□□□□ -1.58
RoraP51448 Gm23839-201ENSMUST00000116957 109 ntBASIC5.21□□□□□ -1.58
RoraP51448 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.21□□□□□ -1.58
RoraP51448 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.21□□□□□ -1.58
RoraP51448 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.21□□□□□ -1.58
RoraP51448 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.21□□□□□ -1.58
RoraP51448 Gm23233-201ENSMUST00000157301 137 ntBASIC5.21□□□□□ -1.58
RoraP51448 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
RoraP51448 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.21□□□□□ -1.58
RoraP51448 Gm38040-201ENSMUST00000193505 225 ntBASIC5.21□□□□□ -1.58
RoraP51448 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.21□□□□□ -1.58
RoraP51448 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.21□□□□□ -1.58
RoraP51448 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.21□□□□□ -1.58
RoraP51448 Gm44580-201ENSMUST00000206333 877 ntBASIC5.21□□□□□ -1.58
RoraP51448 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.21□□□□□ -1.58
RoraP51448 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.21□□□□□ -1.58
RoraP51448 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.21□□□□□ -1.58
RoraP51448 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.21□□□□□ -1.58
RoraP51448 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.21□□□□□ -1.58
RoraP51448 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.21□□□□□ -1.58
RoraP51448 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.21□□□□□ -1.58
RoraP51448 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RoraP51448 Gm6776-201ENSMUST00000057752 900 ntBASIC5.21□□□□□ -1.58
RoraP51448 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.21□□□□□ -1.58
RoraP51448 Mir188-201ENSMUST00000083464 68 ntBASIC5.21□□□□□ -1.58
RoraP51448 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RoraP51448 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.21□□□□□ -1.58
RoraP51448 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
RoraP51448 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.21□□□□□ -1.58
RoraP51448 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RoraP51448 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RoraP51448 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RoraP51448 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RoraP51448 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.21□□□□□ -1.58
RoraP51448 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RoraP51448 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RoraP51448 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RoraP51448 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RoraP51448 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms